rs36715069 SNP Detail

Summary

• ID
  rs36715069
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:35124125 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACATGTTA TAATCATCTA
  TAATTTCAGT TCCAGGGAAT CCAATACCCT CTTTGAACAT CTCAATCATA CACATGGGAA
  AACCACTCAT ACATATAAAA TAAAATAAGT ATATCTTTAA AAAGAAGAAG AGGAGGAGGA
  AGAGGAGCTG TCTATAACCC AGTTCAGGCA GAGTCCCAGA CTATTAAACT ATCCCTTTAG
  Y
  TTGCCTGTGC ACAGTCAAAC TGACCCTGCT CAAACCTCAA AAGACTACTT GAGTTGTCAC
  CTCAGGAGTG GGGCCCAGAT CCTGCTGTTT TTAGAATGTT CTCTTGGTGA AGCCAGGAAT
  GATAGCCATT GAACCCCTTC TAAGTCAGGA AGTAAGACAC CAAAGCCATC TTGTTGTGAT
  GTGTAGGGTT TGCCATTGTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51085193	NES14364932	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36715069					SNP	C	C	C	C	C	T	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51085193	NES14364932	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:35124125 () rs orientation: forward

Symbol	Name	Function Class
Gm8245	predicted gene 8245	501 bp upstream
Tex56	testis expressed 56	within coordinates