rs3671534 SNP Detail

Summary

• ID
  rs3671534
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:41657289 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAATG AGCATTTCTC CTCTGCAGTC
  K
  CATTGCTCCT GAGGCTGCTG GAAAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss5047504	WI_WGS_1_42133826	WI	MOUSE	f	SNP	T				G
ss45174966	mCV23267171	ABI	CRAMUS_MOUSE	f	SNP		G			G	T
ss47268392	NES11089310	PERLEGEN	MM_PANEL2	f	SNP	T		G	T		T	T	T		T	G		G
ss148993007	ENSMUSSNP550324	ENSEMBL	ENSEMBL_Sanger	f	SNP		G				T
ss319700306	CHEV_1_41674974	CHEVERUD	SCREENING_POP	f	SNP									G			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs3671534					SNP	T	G	G	T	G	T	T	T	G	T	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47268392	NES11089310	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:41657289 () rs orientation: forward

Symbol	Name	Function Class
Gm70758	predicted gene, 70758	within coordinates