rs36717536 SNP Detail

Summary

• ID
  rs36717536
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:65543098 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGTTAAAT ATGGTAAAGT
  TAAAGAGACC TACTGGGATA GATGCTTTAA ATTTTAAAGG AAAACAAAAT ATACAAAGTC
  TTCTACCACC TGATGAAAAC AGAGATGCTG TTTATTTGAG AATCTCATGG TATATTAGTA
  AATTTTAAAT CATGATAATA TAAACTCGAG CTGTCCAGAG ACTAGGATGA AATCCTACAC
  R
  CTGGAGCACA AACAACTGGG TGAGTTTGTA TGCTATCTGT GTCACTAAAG TGTCCCCACA
  ACCATCACCT GCATGACTGC CACCTTCATT ATCTCCACTA CCAGCATGCC TGCCTTGCCA
  TTAATCTGCT GTTGGGAAAA CAGTCCATGA AAGTAACGTT TTCTGGGGGC ATTTGCTCTG
  TACTCAGGTC TCTGTCTTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss50965400	NES13945779	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs36717536					SNP	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50965400	NES13945779	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:65543098 () rs orientation: forward

Symbol	Name	Function Class
Rr577715	regulatory region 577715	385 bp proximal
Rr577716	regulatory region 577716	1641 bp proximal