rs36729235 SNP Detail

Summary

• ID
  rs36729235
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:75830723 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAAATCTTA CTTTTACATG TCTGTTTTCT ATGGGATAAA
  ATTAAGTAGG TAGAAAGCTG CGTCAACAAC ATCTTCCCAA TTGTAAAGTT TGAAGGACAC
  W
  TATTTGTATT AATTTAAAAA AAAAAAAAAG CTTGTGTGAA TGTAGACAGT AGCACTCAAC
  TCACAAAAGA TTTTTCCACT TCACAACTGT CTGAAAGAGC                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ
ss51553919	NES14683546	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	A	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ
rs36729235					SNP	T	T	T	T	A	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51553919	NES14683546	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:75830723 () rs orientation: forward

Symbol	Name	Function Class
Golim4	golgi integral membrane protein 4	within coordinates
Rr72842	regulatory region 72842	923 bp distal
Rr81458	regulatory region 81458	1279 bp proximal