rs3672937 SNP Detail

Summary

• ID
  rs3672937
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:101865928 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTCCGTTTT TCATAGGTTC CATATCTTTG GCATAAAAGG
  GGTAAATGTG GACTTAAATG TCTGATTGTT AGTGCTTTAT TAATAAGCAT ACCCCCAGAT
  Y
  TCTCATCCCC TAGTTCACAG ATCTCCAATA AAAATCTAAC TTGTAAACAC GTTCATGAAG
  AGCATGGCTT CACTGCTGTC TGGTGCCTTC TCGTGTGAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J
ss5048912	WI_WGS_9_102722295	WI	MOUSE	f	SNP			C	T
ss136869339	ENSMUSSNP7025401	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J
rs3672937					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:101865928 () rs orientation: forward

Symbol	Name	Function Class
Ephb1	Eph receptor B1	within coordinates
Gm31326	predicted gene, 31326	531 bp upstream
Gm69124	predicted gene, 69124	432 bp upstream
Rr198441	regulatory region 198441	1928 bp distal
Rr198442	regulatory region 198442	128 bp distal
Tssr86718	transcription start site region 86718	464 bp upstream