rs36732158 SNP Detail

Summary

• ID
  rs36732158
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:95395428 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCGAACTCA GAAATCTGCC TGCCTCTGCC TCCCAAGTGC
  TGGGATTAAA GGCGTGTGCC ACTACCGCCC TGCTTATTGA CCTTTTTAGA GAGTTCAGCA
  R
  TGTAGCCTCC TAGACTAATG CTTCCCTGGT CGCTCCCCCA CCCCCTTCAC TATACCCCCA
  TCAACCAAAA AATAAACTTC AACTTCTGTA TGGTAAATG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss52036681	NES15049320	PERLEGEN	MM_PANEL2	f	SNP	A		A	G	A	G	A	G	A	A		A	A	A	A		A
ss136828916	ENSMUSSNP3131196	ENSEMBL	ENSEMBL_Sanger	f	SNP		G						G
ss323100854	CHEV_9_95413794	CHEVERUD	SCREENING_POP	f	SNP											A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36732158					SNP	A	G	A	G	A	G	A	G	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52036681	NES15049320	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:95395428 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22151	CpG island 22151	783 bp distal
Gm28424	predicted gene 28424	within coordinates
Rr206888	regulatory region 206888	227 bp distal
Rr383784	regulatory region 383784	within coordinates
Tssr90919	transcription start site region 90919	1483 bp upstream
Tssr90920	transcription start site region 90920	1467 bp upstream
U2surp	U2 snRNP-associated SURP domain containing	1379 bp upstream