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rs36735825 SNP Detail
Summary
  • ID
    rs36735825
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr19:12064811 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TGTATCTACT CACAACATAG
    GTTAGAATAT TTCTAAGCAC TCCTTGATTG CATTGTGCTC ACACAATGTT TTTGAATCTG
    TTTTTTTTTA GACACATGGG ATCTAGTTCA CAGCACTGCT ATTTAAGTCA TTTCTATATT
    CTTCTATGAA GGCTCCCATG ATGATTTGTC TGTTCTAGAA ATCAAATCAA TTTTAAACAT
    R
    AAAATCTAGC TGGGTATAGT GGTTCACAAC TCTAATCTCA GCACTTAGGA GTCCGGGACA
    GGAAGGTTTC TGAAAACTTG AGGCTAGCCT GTGCAAATAC ATTGTATAAT GAAATTTGTG
    TCAGAAAACA AAACACAAAA GCAAAGCAGA ACTAAAGCAT GATTACAGTA TGCAATGATC
    TAGTTCATGC ATTTATTTCT                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
FVB/NJ
KK/HlJ
NOD/ShiLtJ
NZW/LacJ
WSB/EiJ
ss50614068 NES13634618 PERLEGEN MM_PANEL2 f SNP G G G G G G A G G G G G
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
FVB/NJ
KK/HlJ
NOD/ShiLtJ
NZW/LacJ
WSB/EiJ
rs36735825 SNP G G G G G G A G G G G G
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss50614068 NES13634618 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr19:12064811 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Or4d10c olfactory receptor family 4 subfamily D member 10C 163 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory