rs36736954 SNP Detail

Summary

• ID
  rs36736954
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62310646 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTCAGGAGC ATATGGGGAC AAAAACATAT GCCCATAACT
  CTGTTTCCGT GAGTCAGGGT TTCTGGAGTG ACAGCACAGA AGAGCAACTG TAGGACATAC
  Y
  GGGTTATGCT GTGAACAGGC AGGACTGCTT TGGGACACGA GTGAAGTTAG GGAAGGCACA
  GGTTTGCATC TGGAGCTCCG AAGACACACA CGGAAGGGCT                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50422448	NES13457546	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36736954					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50422448	NES13457546	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62310646 () rs orientation: forward

Symbol	Name	Function Class
Adrb2	adrenergic receptor, beta 2	241 bp downstream
Cpgi10125	CpG island 10125	1391 bp proximal
Rr539062	regulatory region 539062	within coordinates
Rr539063	regulatory region 539063	1087 bp distal
Rr539064	regulatory region 539064	1316 bp proximal
Rr539065	regulatory region 539065	1427 bp proximal
Tssr153622	transcription start site region 153622	285 bp downstream