rs36746299 SNP Detail

Summary

• ID
  rs36746299
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:27799924 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTGTTTCT GCCCTCACCC
  ACCTCAGTGG CTAGCTGCTT TCCTGCTGTC CCCGACTCAC TCCTCAGAAA TGATAGCAGT
  TAGTATGTGT GAACAGTCCA CCTCCTTCCT GGCTGCTTTC AGATAAGGGA AACAGTGCTC
  ACAGGAGTCC TGCCTAGAGC TGATCCCCAA TGCTGAGAGA AGAAGGCTGG GACTTAAAAG
  R
  CCTCACCATA GACCATACTG GAGAGTGCGG GATCCTGCAG GTTGGACTTG GAGGAGTGAA
  ATCCCCACTG ATGTTGGTAA AACTCAGCTG GAAGCAGCCA CCTGAGGTGT TTAGCTGATT
  AGCTAGAGAG CCAGGGTCCA ACCTGCCTCT ACTCACAGAG TACAAGCAGC GGCAGCAGGC
  AGAAGAGCAG CACAAGCTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51887571	NES14907998	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36746299					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51887571	NES14907998	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:27799924 () rs orientation: forward

Symbol	Name	Function Class
Fcgbp	Fc fragment of IgG binding protein	within coordinates
Gm10935	predicted gene 10935	within coordinates
Gm21925	predicted gene, 21925	within coordinates
Rr155708	regulatory region 155708	77 bp proximal
Rr170288	regulatory region 170288	within coordinates
Tssr65362	transcription start site region 65362	755 bp upstream
Tssr65363	transcription start site region 65363	796 bp upstream