rs36750702 SNP Detail

Summary

• ID
  rs36750702
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:56820850 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGAG AAACAATGAC TTTTATTTGC
  K
  TTCAGGCCAG GGAAAATAAT TCAGT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss51253272	NES14271670	PERLEGEN	MM_PANEL2	f	SNP	G	G	T	T	G	G	T	G	G	G		T	G		T
ss319733100	CHEV_1_56838535	CHEVERUD	SCREENING_POP	f	SNP											T			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs36750702					SNP	G	G	T	T	G	G	T	G	G	G	T	T	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51253272	NES14271670	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:56820850 () rs orientation: forward

Symbol	Name	Function Class
Rr16634	regulatory region 16634	351 bp proximal
Rr371319	regulatory region 371319	1831 bp downstream
Tssr11738	transcription start site region 11738	474 bp downstream
Tssr11739	transcription start site region 11739	525 bp downstream
Tssr11740	transcription start site region 11740	700 bp downstream