rs36755023 SNP Detail

Summary

• ID
  rs36755023
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:51281204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCATCTG GAGCTCAGGC
  TTCTCTGGTA GAGGACTACA AGCTAATTCT ACAGGGAGTG TAATATTCTG CGTACCTCTG
  TGTGCTCCAC TGTGAAGTTC ACTTACACCA GCAGGCTGAA CCATCTGCTA CCTGAAGGAA
  GGACTCCAGT CTGTCTGTCA TGCCTCAAAT CCAGGGGATA AATCCATGAA TTAGGCATTG
  Y
  AAGCCCAAGG GATCGTTAGA TTTGTCTTTT TTCTCTTTGA GAAGAAGAAA CATACTATAT
  GTGTGTGTTT GTGTGTTTCT GTATCTGTGT GTATAACTGT TTATATGTGT TTGTGTCTCT
  CTATGGGTCT CTAGTCTCTG ACTGTCTCTG TCTCTGTCTG TCTCTCTGTC TCCTGTCTCT
  CTCTGTCTCT CTCTCTGTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51892394	NES14921513	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36755023					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51892394	NES14921513	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:51281204 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm45072	predicted gene 45072			269 bp upstream
Rr647265	regulatory region 647265			within coordinates
Rr647266	regulatory region 647266			885 bp proximal
Slc17a6	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6			Intron
				Noncoding-Transcript-Variant