rs36756521 SNP Detail

Summary

• ID
  rs36756521
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70928299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCTGGGTT CTAACTTCAA
  TCCATAGTTC TAGAAACAGA AGGAAGCAAA GACAGAGCAT AAAAGCATCT TTCCTGGGTG
  GGTCCAGGGC ATCAGTATTT TAACCTTCTT CCTGATTCCA CAAAGGGAGC TGAAGCACTG
  ATTGGCAAAT TCATCAGCTC TGGCTAGGAG GAGTCAACCA AATCAAGTGT AGAGTTAGGA
  W
  GAACCATAAC ATTCCATCTG TCACCAAGTT CCTCCTTCTC ATCACCATGG TCACCATTTA
  TGAGAAAACA CGTATGGGGT GCCTATTAAC TGAAAGGCAT CTCCAGTCTC ACAAACAGAG
  GCAAGGCAAA AGGCCCTGGA GGATACAGAC ATGAGAGCTT CGGCTGAAAG AACAAACCTG
  GGTTCAATTG GAAATCAGTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51673404	NES14828327	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36756521					SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51673404	NES14828327	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70928299 () rs orientation: forward

Symbol	Name	Function Class
Gm66475	predicted gene, 66475	60 bp upstream
Gm66915	predicted gene, 66915	61 bp upstream
Tssr61339	transcription start site region 61339	13 bp upstream