rs36759337 SNP Detail

Summary

• ID
  rs36759337
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:183978485 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCAGTTTC TCCAACACAT
  GATCCCGCCA TGATTATCAC CCTTGCCAGA GGCTCAAAGT AAGAGAGCCT TTTAACCTTG
  AACTGGAACC CCAGAAGGGC AAGCCCGAAA TAGAGCTTTT CTCTTTACCC ATCAATCATC
  TCAGGTGCAT TGTTACAGAC CTGGTGGCTA AGGCTATGCT CTCCAACTTT TTATCTCTTC
  M
  GTTCTAGCTT CTCACTTCCC ATCATCTGCT GGGGACAACA CCAGCTGTTC TGCAAACACA
  GTGTGTATCA AAGGAACCCG ACCATCACGT TCCCTAAGAT CATGCTTTGG GGAGAATGTC
  TTTAAGGAAA GTAGATAAGA TGACTGTCAT CTTCACAGCC GTCCAGATTT GGAAACATTA
  CCACCGTTGC ATCCGTGTAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51415036	NES14448724	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36759337					SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51415036	NES14448724	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:183978485 () rs orientation: forward

Symbol	Name	Function Class
Rr425191	regulatory region 425191	884 bp distal
Rr425192	regulatory region 425192	899 bp distal