rs36759914 SNP Detail

Summary

• ID
  rs36759914
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:15639192 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACTAGCAG TTCAGACACA
  CTCGTGCTGC ATCTGCGTCA TGTTTCCTCC CTCTGGATTC TCTAACCGGG AGGAGAGGGT
  TGCCTGAGCC TTTCTGAGGC TCCCCTCCCA GCTGTTAGAC TTGGTGGAGC AGTAAAGGTG
  GCTCCCCCAG GAGAGGGAAG AGCACAAGGC ATGACAGCAT CTGTGCGCTT GAGAACATTT
  Y
  AGCAGTCGCA GATGATGAAG ACCCCTTGGC ACCTGGCCCA CTCTGGTCCT TGCTTCCCCA
  TCACATGTCA CCTTCATATC ATGAAATTCT GCACGTGCCG CAACTGTCCC CAACCTTCAC
  ATTCCCCAGA CTACCCATGT GCCTTCAAAT GTCCGTCTGC AGATCTTTCC TTAGTCTTGA
  ATTCTACTTC AGTAGGCAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51992409	NES15008325	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36759914					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51992409	NES15008325	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:15639192 () rs orientation: forward

Symbol	Name	Function Class
Slc36a4	solute carrier family 36 (proton/amino acid symporter), member 4	Intron
Tssr83873	transcription start site region 83873	1455 bp upstream