rs36763890 SNP Detail

Summary

• ID
  rs36763890
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:4841497 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATAAAATCC ATTATTTAAA
  ATTAGTTTTC GGGCAGCTAG TAGAGGACAC GGGCAAGATG GCGGTGGTGG CTGGTCTGGT
  GCGGGGACCC TTGCGGCAGG TTTCCAGGCG TTTTCACCGC TCGGCGCCCG CAGCGGTGCA
  GTTGACAGTT CGTGAAGCTA ATAATCAAGG TACGGATGAA GAACTAGAAA GAGATGAAAA
  R
  GTTTTTCTGC TTGGGGAAGA AGTTGCCCAG TATGACGGTG CATACAAGGT TAGCAGAGGC
  CTGTGGAAGA AATACGGTGA CAAGAGGATC ATCGACACCC CCATCTCAGA GATGGGCTTT
  GCTGGAATTG CTGTTGGTGC AGCCTGTGGC TGGGTTGCGG CCCATCTGTG AATTTATGAC
  CTTCAATTTC TCTATGCAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss50908910	NES13484767	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs36763890					SNP	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50908910	NES13484767	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:4841497 () rs orientation: forward

Symbol	Name	Function Class
Gm6123	predicted gene 6123	within coordinates
Mrpl15	mitochondrial ribosomal protein L15	1935 bp downstream
Rr407423	regulatory region 407423	944 bp distal
Rr407424	regulatory region 407424	1198 bp distal
Tssr5799	transcription start site region 5799	152 bp downstream