rs36764729 SNP Detail

Summary

• ID
  rs36764729
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:11174706 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGTAGTTC AACGTTTGTG
  AAGAGAAACA TAAAGATGCA TAGATAGCTA TGAAAAGATA AAGAATACTC TACTACTGGA
  GAGCAAATGG GGAGACAGAA AGGAAAACCT GTTTTCTCTA GGGAGCACAG GCCACCTGCC
  GAGCACCGAA GACTTCCTGA GGGCTTAAAG ACCCTTGGAC AGTAGATGCT CCTTTAACCA
  S
  AGCATGCTGT GAGCTTTCAT TTATTCCTGG AAGACTTAAA ATTCTGGCTT ACATTGCAAA
  TATTTCGTGG ATGATAATCC TTTTATGAAG GATAATCTTT TTATAATATA TATTCATATA
  GTATTATATT ATTTATATTT CATTATATGT TACATAGTAT ACATAAAATA GATATGTATA
  CATAAATATA TTTAAATATA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss50597150	NES13640023	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	C	G	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36764729					SNP	G	G	G	G	G	G	C	G	C	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50597150	NES13640023	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:11174706 () rs orientation: forward

Symbol	Name	Function Class
4930526L06Rik	RIKEN cDNA 4930526L06 gene	within coordinates
Ms4a13	membrane-spanning 4-domains, subfamily A, member 13	605 bp upstream
Ms4ac	membrane-spanning 4-domains, subfamily A cluster	within coordinates
Tssr158299	transcription start site region 158299	650 bp upstream
Tssr158300	transcription start site region 158300	600 bp upstream