rs36768551 SNP Detail

Summary

• ID
  rs36768551
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:58668061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATAAGCCAC ATTGGGAAAA
  ATATGCCCTA TTAAAAATCA GAACACTCCC AGCCACCATT TTCTCAATTC CACAGAATAA
  GTGCTTCCCA TGTGGGAGTG GAGGATGCCC CCAGATGGGT CATTACGCTG ACAGATATCC
  TGGGAAAACA AGCAGACTCT ACCAGACATT TTACCTCAAC ACCGGTGATA AGAGCAACTT
  Y
  GCACGTAAGT TTCCGTTTTA TTTGATTTTC ACTTTAGCTC TCCTATTGGG CAGGCATGGA
  TGGGGCAGGG TGTGAGACCC AGAGCCTGAT AAATGCCAGC AAGTGCTCTC TGCTACTGAG
  CTACTACGTC CTAGCTGCAG ATTTCAACAA GACAGATTTC TTAGGCTCTT GGCTTGGAAA
  AAGTAAAACC AACCTAAATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	PWD/PhJ
ss50903975	NES13492646	PERLEGEN	MM_PANEL2	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	PWD/PhJ
rs36768551					SNP	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50903975	NES13492646	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:58668061 () rs orientation: forward

Symbol	Name	Function Class
Pnlip	pancreatic lipase	within coordinates
Tssr157281	transcription start site region 157281	92 bp downstream
Tssr157282	transcription start site region 157282	72 bp downstream
Tssr157283	transcription start site region 157283	115 bp upstream
Tssr157284	transcription start site region 157284	405 bp upstream
Tssr157285	transcription start site region 157285	1105 bp upstream
Tssr157286	transcription start site region 157286	1176 bp upstream
Tssr157287	transcription start site region 157287	1193 bp upstream