rs36768782 SNP Detail

Summary

• ID
  rs36768782
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:81444345 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTCTACT TATCTTTAAT
  TATCAAAGAT TTTTAAAGCA TAAGATGACC AGAAAATGGC TCTGTAACTC ACACATCACA
  AGAACAGGAA AGACATCGAA CAACGAACGG GCTTGGCTAC AGAAGGATTC CATAAAGAAA
  AGCAGAGTTT GGTGTACGAA CTTTAGAATG TGGCCTTGCG ATGTTAGAGG GAAGAATCTG
  Y
  CCTCCTTGTT TAGCCCATGT CTTTTCCCTA CAATAATCTC AACACTTTCA GCTTCAGTAT
  TTACTGAAAT TAAAATGTCC TTAAATGCAC TGTCATTCTG TGAATAAGTT CAGTTAGTTC
  TACCGTTACG TGCCAAGTGG TAAACAGAGT ACTAAGGGAC CCATCCAGGA GGGTCCAGGC
  AACAGGAAAC ATGCTGGCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50427597	NES14133581	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36768782					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50427597	NES14133581	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:81444345 () rs orientation: forward

Symbol	Name	Function Class
Btbd1	BTB domain containing 1	within coordinates
Gm45016	predicted gene 45016	within coordinates