rs36777471 SNP Detail

Summary

• ID
  rs36777471
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:11174605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCTTTAGG AAATGATTAA
  AATGACTGCT TTGACCCACC CGCTGGGGAC ATTTTACTAT GCAGGCTCTC TGCACCGTAT
  TGGTTTTGGA TTTGATATGA GGCAGTAGTT CAACGTTTGT GAAGAGAAAC ATAAAGATGC
  ATAGATAGCT ATGAAAAGAT AAAGAATACT CTACTACTGG AGAGCAAATG GGGAGACAGA
  R
  AGGAAAACCT GTTTTCTCTA GGGAGCACAG GCCACCTGCC GAGCACCGAA GACTTCCTGA
  GGGCTTAAAG ACCCTTGGAC AGTAGATGCT CCTTTAACCA GAGCATGCTG TGAGCTTTCA
  TTTATTCCTG GAAGACTTAA AATTCTGGCT TACATTGCAA ATATTTCGTG GATGATAATC
  CTTTTATGAA GGATAATCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss50597156	NES13640018	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs36777471					SNP	A	A	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50597156	NES13640018	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:11174605 () rs orientation: forward

Symbol	Name	Function Class
4930526L06Rik	RIKEN cDNA 4930526L06 gene	within coordinates
Ms4a13	membrane-spanning 4-domains, subfamily A, member 13	504 bp upstream
Ms4ac	membrane-spanning 4-domains, subfamily A cluster	within coordinates
Tssr158299	transcription start site region 158299	549 bp upstream
Tssr158300	transcription start site region 158300	499 bp upstream