rs36779608 SNP Detail

Summary

• ID
  rs36779608
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:84987374 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCATTGAAA ATGTAAACGA
  GGAAAATACC TAATAAAAAA AATTTTTTTT AAAAACTGTT TCTTTGCTTT TTTAAGTAAT
  ATATTCTTTG AGATGAATTT TATACCCATT ATACAGTTAA CCCCATGAAG AAAAAAATTC
  AATTAAGGAT TCTAATTTAA ATTCCAACAA GAAAAATAAA CGTATAAAGA CCAGAGAGAA
  K
  AAAATAAAAC TATTATTAAT GATAGAGCAG ATGAGTCTTC TTAGCAATGG CAAAAATCTA
  AACTGTTTAA CATAACAAAT TTAGGAGAAT AGTCTTCAGA TCAACAAGCA AAGTCATCTA
  AGAGAAGGGC TCTGCGGTGA CCTGCCTGAA CATGAAACAT GCTGTAGGCA GCACTCCACA
  GCCACACAGG CCTTTTCACC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51357297	NES13739753	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36779608					SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51357297	NES13739753	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:84987374 () rs orientation: forward

Symbol	Name	Function Class
Exoc6b	exocyst complex component 6B	within coordinates
Rr136960	regulatory region 136960	1574 bp distal
Rr379698	regulatory region 379698	within coordinates