rs36782067 SNP Detail

Summary

• ID
  rs36782067
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:86405728 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAGTTAGA GGTAGTCGTA
  AGCCACCATG TGGTTACTGA GAAATGAGCC TGGTCTTCTA GAGCAACAAA TGCCCCTAGC
  CCCTGAACCA GTTCTTGCAG CCCCTGAATA TACATTGTTC ACCCATGGAG AAAGACTCTC
  CCTCCATGTC TGTGAGTTGT GGCAGTCCAG AGATGCCCCT TTCTCTCTGG GTGTCTGCTC
  Y
  TCTGGAATGA AGGCTGCTCT AGGAGCTTTC CTCTCCGCTC CCCTGTGCCG TGTAGTCTAT
  TGCATAAGCT CAGTCTGTGT GCAATGTTAT GTCTGTCTGC CCACTGACCA GGTTCCAGTT
  TATGAAAGGC ATTTGAGCAG CAAGATTGAG TCCTCATTCT CAAAGTAACC AGTGTCTCAC
  AGGTAACATT TGTCAGAACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51753400	NES14806953	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36782067					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51753400	NES14806953	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86405728 () rs orientation: forward

Symbol	Name	Function Class
Gm44790	predicted gene 44790	within coordinates
Tia1	cytotoxic granule-associated RNA binding protein 1	within coordinates