rs36785831 SNP Detail

Summary

• ID
  rs36785831
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:27859780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATCTTCCT GTGCATCCCA
  TTCAGCCAAA AGAATGGAAT TCACAATAGT GCAGTAGGTG GCTCGGCTAC CAATCATTCA
  ACATCGTGAT TTGGGATTTT ATAGTTAATA TCCTTTGTTA ATGCTTTTTG AAAGCGTTGT
  GTGCATAAGT CTGTTTGAAA CATTCCTTTG TCCTGTGATC GCATCCCTCT GAAACAGGCT
  R
  CACACAAAGG TTGTGAAACA GAAGCCATCC CACAGCTACT CAGTAGCCAA CCGGTGCTAA
  CTTGTGTGGT TAGCGCTGCA CTTTCCTTCA GGTCTCAATT GCTCCTGAAA GCCGTCTGAC
  CCTATTCTTT TTTTTTTTTT AAAGATTTAT TTATTATTAT ATGTAAGTAC ATTGTAGCTG
  TCTTCAGACA CACCAGAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51887357	NES14907145	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36785831					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51887357	NES14907145	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:27859780 () rs orientation: forward

Symbol	Name	Function Class
Fcgbpl1	Fc fragment of IgG binding protein like 1	within coordinates
Rr170293	regulatory region 170293	581 bp distal
Rr380562	regulatory region 380562	953 bp upstream
Tssr65436	transcription start site region 65436	924 bp downstream
Tssr65437	transcription start site region 65437	861 bp downstream
Tssr65438	transcription start site region 65438	807 bp upstream