rs3679112 SNP Detail

Summary

• ID
  rs3679112
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:119356116 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACAGATGGT TGTGAGCCAC
  CGTGTGGTTG CTGGGATTTG AACTTATGAC CTTTGGAAGA GCAGTCAGTG CTCTTGACCG
  CTGAGCCATC TCTCCAGCCC CCATGATAAT TGCAATACTG GGCTGGGGAG TGGCTCAGTG
  AGTAAAGCAC ATGCCAGTCA CTCATGAGGA TCTGAATCAG AGCTCCAGAG TCCACATAAA
  R
  CAAGACGTGG CAGCGCTATA ATCCCTGGAC TCCTAGAGCA GAGACAGGAG GCTCACAGGC
  CAGCCAGGCT GGTGCATGCA GTGAACAGCA GGAGACTGGT GAGAAGGAAA GAGCCAGCCT
  TACTCATGGC TGCTCCTGAC CTCCATGTGT GCACTTGGTG CCTCTGTGCC TGCACCTGCA
  CCCCACATGG CACAGGCTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J
ss5055129	WI_WGS_2_120470432	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J
rs3679112					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119356116 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr64	DNA Segment, Chr 2, Derry C. Roopenian 64	601 bp distal
D2Mit395	DNA segment, Chr 2, Massachusetts Institute of Technology 395	598 bp distal
Exd1	exonuclease 3'-5' domain containing 1	Intron
Rr563524	regulatory region 563524	within coordinates