rs36793676 SNP Detail

Summary

• ID
  rs36793676
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45510705 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGAGACCT ACGTGGCTCT
  CAGCATCTAA AGCAGCTGTG TGGCTTTCCC TGTGTCTCAG GAATACTTCC TGAAAAGAAA
  AAGTCATTAC TGACGTCCTA GAGTGTCTCC TGTCTCCAGA TTAACCCAAC ACAGCCTCAC
  TTCGCCAGTC AGAAGAGACC TCTGATGGTC TCCCTCTGAA CAGTGGTTGA ACCAGGACCA
  R
  GGTAGCTGCT GATGCTTGCA GCCCCTGCGA CCAGGCCTTG CAGGAGTCTG TCCTTGCCTT
  CCTTCCATCC TCTCCTGGCT CTGGCAGGAG GCAGCTGAGA AGAGCCAACT TTGTCTCTGA
  CCCCCTGGGG CCGGTTATAT TTGGATGTTA AAGGTAATGA CACATCCCCA CCAAGCCCTC
  CCTCTTGCCC GCCTGCTTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52012090	NES15026927	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36793676					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52012090	NES15026927	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45510705 () rs orientation: forward

Symbol	Name	Function Class
Dscaml1	DS cell adhesion molecule like 1	within coordinates
Rr195123	regulatory region 195123	1896 bp proximal
Rr200397	regulatory region 200397	1905 bp distal
Rr200398	regulatory region 200398	within coordinates
Rr200399	regulatory region 200399	1296 bp proximal
Rr203915	regulatory region 203915	989 bp distal
Tssr84806	transcription start site region 84806	1793 bp downstream