rs36793928 SNP Detail

Summary

• ID
  rs36793928
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:56583465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTAATATA GAATAAAAGG
  CCTTGCATCA ATGCCTATTA CTTGAGAGTC TTTTTCTTAA AAGTCTTGTT ATTCACTAAA
  GCACTTGATT ATGTAAAGGT GATATTTCTC AATGGAGCAT TTGATAATCT TTTATTTTTT
  AAATCTTCAA ATTTATCTGG TTCTTGCTCA TCACTCTGAG GTTTGAGTGT ACTAACACTA
  M
  AGCAGTAAAT AAATAATAGG AACACAATAT GAACTAACCA GTACCCTCCA GAGCTATGTC
  TCTAGTTGCA TATGCAGCAG AGGATGGCCT AGTCGGTCAT CAATAGGAGG AGAGGCCCTT
  GGTCTTGCAA AGATTATACG CCCCAGTACA GGAGAATGCC AGGGCCAGGA AGCAGGAGTG
  GGCAGGTTGG GGCAGGGGGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51962340	NES14978643	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36793928					SNP	A	A	A	A	A	A	A	A	A	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51962340	NES14978643	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:56583465 () rs orientation: forward

Symbol	Name	Function Class
9330109K16Rik	RIKEN cDNA 9330109K16 gene	364 bp downstream
Glra3	glycine receptor, alpha 3 subunit	360 bp downstream