GTGAG GCCTGTCTGC CAGTTTGCCT M CTGAGGGCTC AGGTCAGGGT TTCAT M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
BALB/cByJ |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ss5055578 | WI_WGS_2_119709225 | WI | MOUSE | f | SNP | C | A | |||||
ss147311954 | ENSMUSSNP3484438 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | C | C | ||||
ss320471648 | CHEV_2_118587634 | CHEVERUD | SCREENING_POP | f | SNP | A | C | |||||
SNP Consensus Information | ||||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
BALB/cByJ |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs3679559 | SNP | C | C | C | A | C | A | C |
Location: Chr2:118592379 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Ccdc9b | coiled-coil domain containing 9B | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr367276 | regulatory region 367276 | 706 bp upstream | ||||||
Rr563322 | regulatory region 563322 | 1845 bp distal | ||||||
Rr563323 | regulatory region 563323 | 514 bp distal | ||||||
Rr563324 | regulatory region 563324 | 392 bp distal | ||||||
Rr563325 | regulatory region 563325 | 476 bp proximal | ||||||
Rr563326 | regulatory region 563326 | 753 bp proximal | ||||||
Tssr25793 | transcription start site region 25793 | 709 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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