rs36804657 SNP Detail

Summary

• ID
  rs36804657
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:60661437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCCCCTTCA CGTAGGCACA GCATACATGT AAGACAAGCA
  AATAGAAATC TCTCATTTGG GGGTTGAGGT GGTAGCATAA TCGGTAAAAT GCTTATAGAT
  R
  TGTGTTATTA GACGCGTTCT CACGACCGGC CAGGAAGAAC ACCACAGACC AGAATCTTCT
  GCGGCAAGGC TTTATTGCTT ACATCTTCAG GAGCCAGAGT                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss50418770	NES13464114	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs36804657					SNP	G	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50418770	NES13464114	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:60661437 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10090	CpG island 10090	1644 bp distal
Dctn4	dynactin 4	within coordinates
Gm58902	predicted gene, 58902	1938 bp upstream
Gm58903	predicted gene, 58903	57 bp downstream
Rr351670	regulatory region 351670	354 bp proximal
Rr352957	regulatory region 352957	636 bp distal