rs36808576 SNP Detail

Summary

• ID
  rs36808576
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:75767719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTGATGTT GTTGACTGTG
  GTAGAATCTT ACTGGAAGAA GTGGATGACT GGGGCTGGCA GGGAGATTTC ATGGCCACAC
  TCCACTTCCC ACTTCCCCTC TCATCTTTGA CTAACTAGCC ACTGTCATGC CTGCTGGCAT
  ATGGAAAGCA TCTACTATAC CCTAAGCCAG AGAAAATCTG CTCCATTTAA ATTTCGTCTT
  R
  CCAGATATTA GGTCACAGCA ATGCAAAATA TTGTGAATAC AACCAGAAGA AATCGTGAAA
  TCTCATGTTT TTATCTCTAT TCTGGCATAA GTATCAGTAT GTCTCCCATG TCTCCCACAA
  GTATCTTCAG ACACACCCCT AGTAACTTGC TTACCCCAAT AATTTAAACA CAGTTTAAAC
  TACCATTTTG CAACCTTACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51554978	NES14684345	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36808576					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51554978	NES14684345	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:75767719 () rs orientation: forward

Symbol	Name	Function Class
Rr397723	regulatory region 397723	1257 bp upstream
Rr578364	regulatory region 578364	239 bp proximal
Rr578365	regulatory region 578365	1347 bp proximal
Rr578366	regulatory region 578366	1468 bp proximal