rs36812835 SNP Detail

Summary

• ID
  rs36812835
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:38305073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGGCTCTCC TCTTCTAGAG CTTTAACAGC TTTGACCTGG
  CTGGCTGCTT TCACAGCTGG CTTTCGGGTC AGGACAAGAT GGTGACCTGT CTACGGCCTG
  K
  TTTTTCTTTC TTATGTTCGT CAGGGTCATT AGAGATCATG ACACTCCTCC AATCAGACCA
  AGAGCATAGG ACAGGTCAAA GAGATACCAT CAGATGGAGG                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51097453	NES14354894	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36812835					SNP	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51097453	NES14354894	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:38305073 () rs orientation: forward

Symbol	Name	Function Class
Rr271625	regulatory region 271625	928 bp proximal
Rr275879	regulatory region 275879	1073 bp distal
Rr279089	regulatory region 279089	241 bp proximal
Rr279090	regulatory region 279090	631 bp proximal
Rr279091	regulatory region 279091	1310 bp proximal