rs36814629 SNP Detail

Summary

• ID
  rs36814629
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:15640109 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTGTGTGA TTCTGCTGTT
  TAATTCTAAA TAGTTAGAAT TAGATAAAGC TGTGACCGGG TTTCTTTTTT CTTTTCTGTC
  TTCTGCAGAA CATGCCAGAT CCCCACAACC TTCCAATAGT GGCCGGCTGG AAGAAATACC
  CACTGTTTTT TGGCACTGCT GTGTTTGCTT TTGAAGGCAT AGGAGTGGTA AGAATCAGCC
  R
  TTACTTGGTC TGTTTTTAAA CTCTTAAGTT AACACAAGAT TTTATATAGT AAAACTACAT
  AAAATACATA TTTTCTTTCA GTGTTTTAAT TTCTTTTATG CATAGGCCAT AACTCCCAGT
  TTGGTGGACG CATGACAAAA TGAAACAGAA GGAGGGGTAT ATGACTACTC CTAAGAGATA
  GAGAAGACTT TTATTACAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51992403	NES15008333	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36814629					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51992403	NES15008333	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:15640109 () rs orientation: forward

Symbol	Name	Function Class
Slc36a4	solute carrier family 36 (proton/amino acid symporter), member 4	Intron
Tssr83873	transcription start site region 83873	538 bp upstream