rs36816084 SNP Detail

Summary

• ID
  rs36816084
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:90884108 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCTCCCTC CCCCTCTTCT
  CCCCCTCTCT CTCTGCATGT GTGCATGTGT ACGTGTGTGT GCATGCATGT GCATGTGTGT
  GTGTGCACAC ACGTGTGTGC ATGTGCTCAT ATGTGCATAT GTACGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTATTTTTCT CAGCCCCTGA TCTTACATCA TAACATCAAC CTTCTGAAGC
  R
  CCCAGTGGCC TGTTCTTTAA AATGATCCTT GCTGATTATC CCACCTAGTG GTGAGCCTGA
  CACTGCTCTT GCACTTCCTG TCACAGAAAA GGACCTGGGC CTTAGCTGGA CATTATACTC
  TGCTGTCCAA AAGTCCTGGG TCCTCTGATG GAGTCCTGGG TCCCACTTTG ACATGTTGAC
  CTTGACCTTG AGTTCAGGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ
ss51301158	NES14511530	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ
rs36816084					SNP	A	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51301158	NES14511530	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:90884108 () rs orientation: forward

Symbol	Name	Function Class
Rab17	RAB17, member RAS oncogene family	1747 bp downstream
Rr415504	regulatory region 415504	17 bp proximal
Rr415505	regulatory region 415505	496 bp proximal
Rr415506	regulatory region 415506	643 bp proximal