rs36821232 SNP Detail

Summary

• ID
  rs36821232
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:69467278 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGTCCTCAG TTGTCTCTGC TCAAGTCAGT
  ATGCGCATTC AGGTTATAAA TTTTGCTTGT GTGAGAAAAT GAGACAACCT TGAGTATGTG
  GAGTGATCTC GGCAGAATTC AGAGCAACTA ATTCACCAGT CCTCTGCTTC TAACGGGCAC
  R
  GTGCAATCAG AAGAGGCGCT CTACTCTGCC ATGAGATGGG AAATACGACA TTTATACTGT
  GTGAACTCAG ACCAAACAAC CTGTCTAATG GCTTCTTATT AAAACCgtgt gtgtgtgtgt
  gtgtgtgtgt gtgtgtgtgt gttgtatgca                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss51265574	NES14271298	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	A		G	A	A	G
ss319781350	CHEV_1_69474693	CHEVERUD	SCREENING_POP	f	SNP										G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs36821232					SNP	A	A	A	A	A	G	A	A	A	G	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51265574	NES14271298	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:69467278 () rs orientation: forward

Symbol	Name	Function Class
Gm69966	predicted gene, 69966	1637 bp downstream