rs36826236 SNP Detail

Summary

• ID
  rs36826236
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:126167085 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATTACCCC AGGACCACAT
  TGGCAGCAGA GGGGCCTGAT GGAAGGCTAA TGTCTGCTCC TTTTACTGAG TGAGCACCAA
  CGGTCTCTTC TGCACTCTTT CTGCAGCTGA CTCCTGCCCC CAAGGTTTCC TGGAGGGAGG
  GAAGGATGAC CACCTGAAGA CTTGATAAGA AGATGGGAGG ATTAATTACC TCATTAATGA
  R
  GATTGTGCCT AAGTACTACA GCAAGCTCTC CCTCAGGTAG CTGCAGACCC ACAGGACTAA
  AGCTTGCTCA TCTTTTGGGA GTTCAAACTC AAAAATGCTG ATACTTTCTC TCCCTTCTCC
  ATCCTGCACT CTTCTTTCCA GTTTCTTGCT GTTTTTTTTC CCTCTCTCTT CAATCGTGTG
  TGTGTGTGTG TGTGTGTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ
ss51820872	NES14712608	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ
rs36826236					SNP	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51820872	NES14712608	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:126167085 () rs orientation: forward

Symbol	Name	Function Class
D5Mit214	DNA segment, Chr 5, Massachusetts Institute of Technology 214	155 bp proximal
Rr116253	regulatory region 116253	885 bp distal
Rr116254	regulatory region 116254	1916 bp proximal