rs36830708 SNP Detail

Summary

• ID
  rs36830708
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131075272 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATATAAGTT TGTGGTGAAG
  CCGATGATGA CCTTAAACGC TTGTTCCCCC TGGCTCTGTC TCCATGTGTG CTGGCATCAC
  AGGTCTGTTG CCCCATTTCC TGTGTTCCAT GTTGCTTTCT TTGGCTGCGA TAAACACAGT
  TACCAAAAAG TAACTTGGGA AGGAAAGGGT TTATTTCATC TTAGAATGTG GAGTTCATCA
  Y
  GAAGGGAATT TAGAGCAGGA GCCTGGAGCA CTGAAGCAGG AGCCTTGGAG GAGTGCTGCC
  TGCTGGCTTT GCTCCCCGTG GCTTGCTCAA CTTGCACCAC TCAGAGCAGG CTGGGCCCTT
  TGTTTTGGTT ACTCTTCTAT GGCTGTGAAC ACAGAGTCCA TGATAGAGGC AACTTACAGA
  AGAAAGAATT TGTTGGGGTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51633080	NES14658192	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36830708					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51633080	NES14658192	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131075272 () rs orientation: forward

Symbol	Name	Function Class
Rr585318	regulatory region 585318	1357 bp proximal