rs36832868 SNP Detail

Summary

• ID
  rs36832868
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:128847148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTCTCTCC CTCCCTCCCT
  CCCCCCCTCT CTCTCTCCTT CCCTTTCTCC ATCTTCCCCT GTAGCCCAGA CTTTCCTTGA
  ACTTACAATC ATGTACCACT TTAGCCCCCA GATTTTTATA TTATAATACA AAAGAGAACT
  TATCTCAGAG AGACAGTAAG CAGACAAATA CTTTAGAATG TGACATAGTC ATATCCCAAG
  Y
  TCATGTGTTA ATTTGAGAGA GAAAGAGGGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA
  GAGAGAGAGA GAGAATGAGA ATACACCAGG GATTGGAACC CCCCAAAATG AACAGCATTT
  TTTTTTGATG TTTCAAAAAC TTACATAATA AAATCCATCT TCATCGATTT CACCAAAAAC
  AGTAATAATG TCTCCTGTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51843323	NES14704409	PERLEGEN	MM_PANEL2	f	SNP	C	T	T	T	T	T	T	T	T	C		C	T	C	C		C
ss321688104	CHEV_5_129275959	CHEVERUD	SCREENING_POP	f	SNP											T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36832868					SNP	C	T	T	T	T	T	T	T	T	C	T	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51843323	NES14704409	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:128847148 () rs orientation: forward

Symbol	Name	Function Class
Gm42875	predicted gene 42875	within coordinates
Rimbp2	RIMS binding protein 2	within coordinates