rs36833382 SNP Detail

Summary

• ID
  rs36833382
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:11189822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGTCGCTA ATATACTCCT
  CTCTCTTCAT CATATTGCAT TACACAGCAG TCACTTCTTC CTGGCAGTTG TTATTATAAT
  GTGATGAGAC CTCACCATAA CATGTCACAG GGTGCACCAG GCAGCATCTT TTACTTTTAT
  ATGACTGGAT TTTAATGGGA TTTTACGATG CAGCTCTAAG ACATCTAGCC TGCCAAGTCA
  Y
  TCAGCAGAAG CTGAGGAAAT TGTCTTAACT AGCACACTGC GAGGAAATGG TTTAATTTAA
  TACATCATAA AAATAATAAA AAGAGGAAAA TAAAATGGAT AGGCAAAGGG GGAAATTGTT
  TTGGAAAAAA AAAGTCTGGC TTTTTCCTAA ATTAAGATTT TAGGAAATAA AGTTTATCTT
  TTCTTTCTGA CAGAGTTTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	NOD/ShiLtJ	WSB/EiJ
ss51170715	NES14318237	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	NOD/ShiLtJ	WSB/EiJ
rs36833382					SNP	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51170715	NES14318237	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:11189822 () rs orientation: forward

Symbol	Name	Function Class
Gapdhrt	glyceraldehyde-3-phosphate dehydrogenase, retrotransposed	800 bp downstream