CCTGA GGTCAGACTC CAGCCCTGTA K CGAAACAAAA TAGGAACTTA CCTCC K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
KK/HlJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51033513 | NES14395164 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | G | G | G | G | G | G | T |
SNP Consensus Information | ||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
KK/HlJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
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rs36834708 | SNP | G | G | G | G | G | G | G | G | G | G | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51033513 | NES14395164 | PERLEGEN | MM_PANEL | f | SNP | G/T |
Location: Chr12:83571441 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Dcaf4 | DDB1 and CUL4 associated factor 4 | within coordinates | ||||||
Rr257993 | regulatory region 257993 | 41 bp distal | ||||||
Rr265648 | regulatory region 265648 | 1359 bp proximal | ||||||
Tssr114259 | transcription start site region 114259 | 1376 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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