rs36837304 SNP Detail

Summary

• ID
  rs36837304
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5650380 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAAACCCT GGCTCAAAAA
  CAAAAACAAC AAAAAACAAA ACAAATTTTA AGGTCTGTAC ATGGTTGGTG GCAGAATTCC
  GCAGAAAAGA TCCATACACA TCTTAGCAGA GTCAAATCAG CAGCTTCAGT TAGACCACAC
  GCTTGTCAGA GCAGCTGAGT CCCTTTGATA GTTGAAAGGT ACAGCTAAGA GCTATTATTC
  R
  GGCTATTGAT TAGTGGTTCA GGCTGGGAAA GCCCACTGGA ACGTATGAGA TGGCTTGACA
  ATGGGTGTAA GGAGGTACAA TATGTGCAGT GTGAGCTGGT GGGGCATGTG CAGTGAGCTG
  GTGGGGCATG TGCAATGAGC TGGTGGGGCA TGTGCAGTGT GAGCTGGTGG GACATGTGCA
  GTGAGCTGGT GGGACATGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	CAST/EiJ	MOLF/EiJ
ss50578394	NES13651154	PERLEGEN	MM_PANEL2	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	CAST/EiJ	MOLF/EiJ
rs36837304					SNP	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50578394	NES13651154	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5650380 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10461	CpG island 10461	1341 bp proximal
Rnaseh2c	ribonuclease H2, subunit C	1521 bp upstream
Rr363585	regulatory region 363585	1220 bp proximal
Rr370434	regulatory region 370434	1424 bp upstream
Tssr154457	transcription start site region 154457	1489 bp upstream
Tssr154458	transcription start site region 154458	1502 bp upstream