rs36841615 SNP Detail

Summary

• ID
  rs36841615
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:58778547 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCATTTAAC AACAATAACA
  AAAACAAAAG GACTGAGGGG ACTGGTGAAG AACTTAGTGT TAAGCTGCAA AGTAAATAAA
  TGTCTCTCCA TCCTGAAGCA CACTGTTTTC ACCTTTGTTG CTTAAGAAAG AAAACCTACT
  TAACACCAGG ACCAATGTGA CCATTGTAGT CCCCAATAGC AAAGAATACC TTGAACCTGG
  K
  CTGCTGGCCA GCCCGAGTCT GCTTCTGCAC GGGCATGATT TTCAGAACCT CATCCTTTAG
  GGATGCACCC AGGACTCTGT GTGGAGAGGC TACTGGGGGA ATTGGCAAGC CCCACACTGT
  TCCATGCAAG GTGACAGGCC GCTGTGGCTC TGTGCTGGTG CGTCTCATCC CTGCCCCCAG
  AGGCACTGGC ATTGTCTCTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50903131	NES13490972	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	G	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36841615					SNP	T	T	T	T	T	T	T	T	T	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50903131	NES13490972	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:58778547 () rs orientation: forward

Symbol	Name	Function Class
Gm17150	predicted gene 17150	80 bp upstream
Gm56672	predicted gene, 56672	1216 bp upstream
Spmip5	sperm microtubule inner protein 5	within coordinates