rs36843383 SNP Detail

Summary

• ID
  rs36843383
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:69619354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGACAATTT GGGTAAAGTT
  TCTTATCCAG TCAGAGCATG TCAACAGCCG GCTATTTTGC ACATGTGTAA GGAACAGGTT
  TTTGGAAGGC ATTCTTTTGA GGAACAAGGT GGAAGGCTGA AGGTTGCTAC ATGGGGTCGC
  TGGTATAATA CACACAAGTC TGGAAATGAC TGCCAAGGCA GTGATGAGCC AGCACACAGA
  M
  TGAAGCCCGT CCTGCAAAAG CCCGATTATC AGATGATTAA AAAGCTGAAC TCAAGGTAAT
  TCTTACTACA GAGCAGCTGT GAGGAGTGTG ACAGACTGCA ATTGGTGGCT TGTCGGAGCC
  TGAGAAAGTC TGTGGGCTCT CCGTATAGTC TGGCTTGACC TCAAGATGTC TAATCCTGTT
  CTGTAAGGAG GAAACGTCGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51017795	NES14400734	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	A	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36843383					SNP	C	C	C	C	C	A	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51017795	NES14400734	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:69619354 () rs orientation: forward

Symbol	Name	Function Class
Rr257072	regulatory region 257072	954 bp distal
Rr257073	regulatory region 257073	447 bp proximal
Rr403327	regulatory region 403327	1964 bp upstream