rs36845114 SNP Detail

Summary

• ID
  rs36845114
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143565427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGTTAGTC TGCTCCTACA
  AAATCTGGCA CTGGAACCAT TTATGCAACC AAATGGCACT TTAGCAGAAC AGTGTGTAGT
  GCATAGGTTG AGACACAGTG GTGAAGAAGG AAATATAACA ATCCCCAATT CTGATAATTC
  GCTTACCATG AGATATAGAA CAGAGGATGT TTTTTGCTGT CTCTATACTT ATTTCCTTAT
  Y
  TTTAAAGTGA GAACAGAGAA TTATAGAAAG GTGACTGCTG TTTAGTTTGA AGAAAAGAAA
  GAAAAAAGAA TGAGATTCTT ATCTTCACCA GGATTCCTCT AGTCAACTGT GCTATATCTC
  ATTCTGTCCT TTATTCTTTA TTATTAATAT TTAAACTTAA TTAAATTACA AGTTTATTTA
  TATTAAATGA AGTAACAGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51659579	NES14643746	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36845114					SNP	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51659579	NES14643746	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143565427 () rs orientation: forward

Symbol	Name	Function Class
Gm33925	predicted gene, 33925	within coordinates
Gm40160	predicted gene, 40160	1769 bp downstream