rs36845531 SNP Detail

Summary

• ID
  rs36845531
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:10971508 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACACTCAT ACACACTTAC
  TCTCACATTC ACACACATAC ATGCTCATAC ATACATAAAT ACATGTAGAC ATGCATTCAC
  ACATAACATG CACACACACA CACACACACT CACACACTTC CTGCCTCTCA GGAGACTGAG
  CAGTGTTTGT CTTTATTTTA CAGGCATGGT CTTGAATATC AAAGACCAAA AGTCCTATGA
  R
  TACATTCAGT ACAACTTATT CACAAGGAGC CTAAGGCCAC GAGAGGCTCC TGCCCAGCCC
  CCAACACCGT AGGTTCCGAT TTCCTCCTCA CTTTCTGGAA ACTAACTCCT AAATCTTATG
  ATTTGAATTC ACTCTTTGAA ATTGTCCCAT TTGGGGAGGT GAAGCCGCAG ATTGTCTCGT
  AACCCAAACC TCGCCCATAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51942744	NES14965281	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36845531					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51942744	NES14965281	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:10971508 () rs orientation: forward

Symbol	Name	Function Class
D8Ertd130e	DNA segment, Chr 8, ERATO Doi 130, expressed	1057 bp distal
Gm32594	predicted gene, 32594	424 bp upstream
Gm44955	predicted gene 44955	within coordinates
Rr659385	regulatory region 659385	within coordinates
Rr659386	regulatory region 659386	729 bp proximal