rs36845551 SNP Detail

Summary

• ID
  rs36845551
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:81933460 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGATCTGTC TGGCCTCCAT
  GGGCATGGAC AGCACACTGG ATAAAAGTAG ATAGACTGCC ATGAATTTTC TTCCCTTCAG
  TATACTTATA TCGAGTCCCC TGCTGTTTCC TTCTCTCGGA TGTCTGTTAG GACTGGGGAA
  CTGTACGCAT TGCTGGAGAG TTCAGAGCAG ATTCCATCTG CTTTATGCTT TTAGCCATGA
  R
  GAATGACTCT AATCAAGTCG TTTTTGTTTT TTTTAATCTC AATTATTTTA TATGTATGGG
  TGTTGTGCCT CTGTGTATGC CTATTCTGTG ACTGCAGTAC CTGAGGAGGC CAGAAGGGGG
  CATCAGATGC TTTGGAACTG TAGATAGAGA TGGCTATGAG CTGTCATGCG GGTTATAGGA
  ATTGAACCTG GGTCCTCTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C3H/HeJ	DBA/2J	MOLF/EiJ	MSM/Ms	PWD/PhJ
ss51348133	NES13741196	PERLEGEN	MM_PANEL2	f	SNP			A	A	G		G
ss133338033	ENSMUSSNP3139114	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C3H/HeJ	DBA/2J	MOLF/EiJ	MSM/Ms	PWD/PhJ
rs36845551					SNP	G	G	A	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51348133	NES13741196	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:81933460 () rs orientation: forward

Symbol	Name	Function Class
Gcfc2	GC-rich sequence DNA binding factor 2	within coordinates
Mrpl19	mitochondrial ribosomal protein L19	1372 bp downstream
Rr632566	regulatory region 632566	106 bp proximal