rs36847429 SNP Detail

Summary

• ID
  rs36847429
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:115454767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCCGCACC TTTGGACTGT
  GGGAAAAAAA TGGAGCCCAA GAAAACTAGA ATTTCCTTAA GAGTCTTATG CTAGGAAAAG
  GGAAAGGCTT GTCCTGGTGT CAGCCTGAGA TGACAAGCTT GTCTCCTGGA AAGAGGTTCT
  GGAAGGTTCA GGCAACCATC TTATCACACT CCACCTTGTG GGAGAGACTA GAGCAGAGAC
  R
  ATAGTGGGTC AGTGAGGGAG CAGACACACC CTGACCAGAG ATCTGGCTGT AATTATGCAT
  AACACACACA CACACACACA CACACACACA CACACACACG CTACCCTCCC CCACCCCCCT
  GTTCCTCGGA AGGTGGACTT GGTTAATCCC AGGACCTCTT TGTCCCTCTT CACATTTTGA
  CCATACTGCG TTGGCCACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50798474	NES14206639	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36847429					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50798474	NES14206639	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:115454767 () rs orientation: forward

Symbol	Name	Function Class
Gm68175	predicted gene, 68175	within coordinates
Gm68176	predicted gene, 68176	591 bp downstream
n-R5s92	nuclear encoded rRNA 5S 92	901 bp downstream
Rr370673	regulatory region 370673	1401 bp downstream
Rr687898	regulatory region 687898	1264 bp distal