rs36848069 SNP Detail

Summary

• ID
  rs36848069
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:84116818 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTATGTAAA AATTTATCAT
  TTTTTTAAAA AAACATAGTA CGCCAATGTA TCTGTTTTTC CCAGAAACAT TGAAAAGGAT
  TTGTTGAAAC GATGTACTGC CATTCCATCC TTTCCACAGC CCAAGTGTCC ATAAAACATA
  ATGACTGGGT GGAGGGTGGC AGCGAGGAAA CCCACCATTG CTCATTCTTT ATGTTGATCG
  M
  GAGGGCTTTG AAGACACACA TGATCAAACG TGGTGAATCT GGAACAAAAA GCAACCCGTA
  TTTCCTGAAT CCCTTGCAGT CATTTCCCAG CTTCTCTCAT TTCTGTGAAC TCTCATTTTA
  TATCCTTTCT CTAATACCAC CATCTCAGGA GTAGCTCTGT CTCCTACTTA TGCGTGCTGA
  AGGAAGTATC TGGTTTTGTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52030593	NES15049417	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36848069					SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52030593	NES15049417	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:84116818 () rs orientation: forward

Symbol	Name	Function Class
Tssr86376	transcription start site region 86376	611 bp downstream