rs36857827 SNP Detail

Summary

• ID
  rs36857827
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103961308 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAGCCCACG CGGCTAAGGG
  TCCAGCCCAG CAGGAGAGCA ATTGCCTGCT GTTGGAAAGA CTCTGAATTT GCTCCCTCGA
  GCTGCTGAGG GCTAAGGGAT CCAAACTGAA CAATAAGCCC AAGGCTCCCA GATATGGCAG
  CTCCTCCTAA GGATATTTTG GATATCTGGG GAGACCTTGC CTTATTTTAA GAGATATGTA
  M
  TAATGACTTT GGACACCTTT GTAACCTTCT CTTTTTTTTT CTTTTGCCCA GAACTCTCAG
  GACTACACCA CCACAGGCTG ATGCTAAAAG CCAGCTGTTT GCACAGAGCA GGAGAGGCCA
  GGAAGTTCTC ACTAGAGTGA AGCAGTTCAT GAAGCAGCAT GTCTTTCCTG CTGAGAAGGT
  AGTGTGTGCA AGGACTGTGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50790715	NES14206958	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36857827					SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50790715	NES14206958	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103961308 () rs orientation: forward

Symbol	Name	Function Class
Acad11	acyl-Coenzyme A dehydrogenase family, member 11	within coordinates
Rr383851	regulatory region 383851	within coordinates