rs36862058 SNP Detail

Summary

• ID
  rs36862058
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:69843448 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGGGACCAA ATGCTCTTTG CATTATGCTA TGGCTACAAG
  CCTATGGTGG TCAGGGAGCA GAATGTAGTG GTTTGAATGA AAATGTCCCT CATAGGCTCA
  Y
  AGGGAGTGGC ACCATTAGGA GGTGTGGCCT TGTTGGAGGA AGTGTGTTAC AGTGGGTGGG
  CTTTGAGGTT TAAGAAGGTC TTGATAGGCC CAGTGTCATT                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ
ss50977332	NES13926055	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ
rs36862058					SNP	C	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50977332	NES13926055	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69843448 () rs orientation: forward

Symbol	Name	Function Class
Rr578246	regulatory region 578246	824 bp proximal
Rr578247	regulatory region 578247	1018 bp proximal