rs36865862 SNP Detail

Summary

• ID
  rs36865862
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:90880384 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTCAGAAC ACTCCATCAG
  CAGGGTACCA GTTCCCATAC ACAGTGGCGG CAGCCTTCCC ATGTCATTCA GGGGGACTCT
  GTGAGGAGAG GCCCATTCTG GAGTCTCAGC AAACTGAGTC TAAAGTCCTG GGTTATTGTA
  GAGGCTGTGA GGTGTGAGCT CTCTGGGGAT GTGGGATGCT AAGTGTCCTC CATTGCCTGC
  M
  TGGCTCTCAG TGTCAGGAGA TCCCAGACAA AGTGTGAGGA AAGCCTGGGC ACTGAGGTTC
  CAATATGTTC CAACTCCTAG CTACCTCTGA GGTTGGGCAA ATTGTTCTCC ACCTCTGCTG
  ACCACAAGGC TGCCCATAAA TCTGCTTCCC ACCAAGGCCT GGGTGTCTAC CTCCCAGCTC
  TTGACACAGA TGGACAGACA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss51301206	NES14511605	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	A	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs36865862					SNP	C	C	C	C	A	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51301206	NES14511605	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:90880384 () rs orientation: forward

Symbol	Name	Function Class
Mlph	melanophilin	1520 bp downstream
Prlh	prolactin releasing hormone	446 bp upstream