rs3687995 SNP Detail

Summary

• ID
  rs3687995
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:54567685 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT TATCAGTGAG GCAGACCTAG
  R
  GCCTGTGAGC TCAGATGTTC AAAAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss5064079	WI_WGS_9_55191192	WI	MOUSE	f	SNP	G							A
ss46316662	mCV24160765	ABI	CRAMUS_MOUSE	f	SNP		G	A					A		G
ss52018250	NES15041872	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	G	A		G	G	A	G		G	A	A	A		G
ss136506896	ENSMUSSNP1539133	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A							G
ss322965572	CHEV_9_54508208	CHEVERUD	SCREENING_POP	f	SNP													A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs3687995					SNP	G	G	A	A	A	G	A	A	G	G	A	G	A	G	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52018250	NES15041872	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:54567685 () rs orientation: forward

Symbol	Name	Function Class
Acsbg1	acyl-CoA synthetase bubblegum family member 1	within coordinates
Rr206444	regulatory region 206444	915 bp proximal
Tssr89653	transcription start site region 89653	1265 bp downstream
Tssr89654	transcription start site region 89654	1443 bp downstream
Tssr89655	transcription start site region 89655	1483 bp downstream