ACAGGAAGCA CAACGGGGCT GCCTCTGGCT CTCTCCAAGT GATGTAGACC GAGCAGCTTT GGTGTTTTCT CTGGAAGAAG AGATAAGACT GTACTGTAGT GACTGCTAGT AATTGGAAGA AACAGAAATT TCTGGAAAAT CAAAAAGTGT GGAGCTACTT CTTTATTCAG TAGACAGGAG GCCAAAGAAT TGTGAGAAAG M AGTTTGGAAA AGTAAACCTC GTTTTTGTTC TTCCTACAAA GATAATTTAT TTCTGTATAT GACCTTGCCT GATGCTAGGC TTAGGCTAAT ATACACTGAG AAGATGTGTG TCTTAGTTTC AGTTCTGCTG CTATGGGGAA ATGCCCTGCA ACTCATAAAA ATAAAAATAA ACCAACAACA AAAACAAAAG CAACTCAAGG M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51521487 | NES14761389 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | A | A | A | A | C | A | A | A | C | A | A | A | A |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs36893257 | SNP | A | A | A | A | A | A | C | A | A | A | C | A | A | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51521487 | NES14761389 | PERLEGEN | MM_PANEL | f | SNP | A/C |
Location: Chr5:133101479 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Tssr49076 | transcription start site region 49076 | 668 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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